STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK38_01670Unannotated protein. (170 aa)    
Predicted Functional Partners:
fbiB
Unannotated protein; Bifunctional enzyme that catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives, and the FMNH2- dependent reduction of dehydro-F420-0 to form F420-0.
       0.673
GCA_000718635_05913
Unannotated protein.
       0.660
ADK38_35865
Unannotated protein; Belongs to the Dps family.
  
  
 0.643
ADK38_11470
Unannotated protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.581
ADK38_35000
Unannotated protein.
  
  
 0.530
ADK38_03065
Unannotated protein.
   
  
 0.473
ADK38_47845
Unannotated protein.
   
    0.465
GCA_000718635_02429
Unannotated protein.
  
    0.464
ADK38_05235
Unannotated protein.
  
    0.464
ADK38_35925
Unannotated protein.
  
    0.464
Your Current Organism:
Streptomyces varsoviensis
NCBI taxonomy Id: 67373
Other names: ATCC 14631c, ATCC 25505, Actinomyces varsoviensis, BCRC 12647, CBS 357.64, CBS 647.69, CCRC 12647, CCRC:12647, DSM 40346, IFO 13093, IMET 43351, ISP 5346, JCM 4303, JCM 4523, NBRC 13093, NCIMB 9522, NRRL B-3589, NRRL-ISP 5346, S. varsoviensis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.