STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725805_05352Unannotated protein. (612 aa)    
Predicted Functional Partners:
GCA_000725805_05353
Unannotated protein.
       0.773
GCA_000725805_06088
Unannotated protein.
  
   0.636
GCA_000725805_06231
Unannotated protein.
  
     0.620
GCA_000725805_03683
Unannotated protein.
  
     0.608
GCA_000725805_03206
Unannotated protein.
  
     0.576
GCA_000725805_06935
Unannotated protein.
  
     0.559
GCA_000725805_03583
Unannotated protein.
  
     0.558
GCA_000725805_05980
Unannotated protein.
   
    0.523
GCA_000725805_00462
Unannotated protein.
  
 
  0.511
GCA_000725805_03562
Unannotated protein.
  
     0.508
Your Current Organism:
Streptomyces xanthophaeus
NCBI taxonomy Id: 67385
Other names: ATCC 19819, BCRC 13756, CBS 572.68, CCRC 13756, CCRC:13756, DSM 40134, IFO 12829, ISP 5134, JCM 4426, KCTC 9220, NBRC 12829, NRRL B-5414, NRRL-ISP 5134, S. xanthophaeus, UNIQEM 208
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.