STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725805_06805Unannotated protein. (272 aa)    
Predicted Functional Partners:
GCA_000725805_06803
Unannotated protein.
 
  
 0.972
GCA_000725805_01044
Unannotated protein.
  
  
 
0.921
GCA_000725805_00175
Unannotated protein.
  
  
 0.904
GCA_000725805_06806
Unannotated protein.
       0.836
GCA_000725805_06791
Unannotated protein.
  
  
 0.720
GCA_000725805_01699
Unannotated protein.
   
  
 0.684
GCA_000725805_05544
Unannotated protein.
     
 0.682
GCA_000725805_00165
Unannotated protein.
 
  
 0.681
GCA_000725805_06802
Unannotated protein.
       0.653
GCA_000725805_06800
Unannotated protein.
       0.632
Your Current Organism:
Streptomyces xanthophaeus
NCBI taxonomy Id: 67385
Other names: ATCC 19819, BCRC 13756, CBS 572.68, CCRC 13756, CCRC:13756, DSM 40134, IFO 12829, ISP 5134, JCM 4426, KCTC 9220, NBRC 12829, NRRL B-5414, NRRL-ISP 5134, S. xanthophaeus, UNIQEM 208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.