STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN10178.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)    
Predicted Functional Partners:
KUN10179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.927
KUN01859.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.900
KUM99621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.900
KUN00056.1
PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.899
KUM99158.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.899
KUM98320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.899
KUN02337.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.898
KUN04892.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.893
KUN02537.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.892
KUN08479.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.887
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.