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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN10288.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
KUN10287.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.989
KUN10289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.988
KUN10290.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.903
KUN10286.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
KUN10607.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.665
KUN08815.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
KUM99661.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
AQI95_38120
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.663
kptA
RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.648
KUN10293.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.637
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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