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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN09223.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)    
Predicted Functional Partners:
KUN09224.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
KUN09225.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.957
KUM98064.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.856
KUN08325.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.849
KUN01304.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.844
KUN02801.1
2-keto-myo-inositol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.808
KUN01310.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.744
KUN01306.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.714
KUM99658.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
 
  
 0.687
KUM99657.1
5-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.679
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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