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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN07748.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
KUN07747.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.847
KUN06023.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.731
KUN04471.1
Amidohydrolase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.731
KUN03367.1
2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.731
KUM95462.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.731
KUN04949.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.718
KUN02880.1
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
    
  0.718
KUN09401.1
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.710
mshB
N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
    
 0.710
KUN10200.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.680
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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