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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN05117.1ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
KUN05116.1
Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.964
KUN05115.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.960
KUN05118.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
KUN08547.1
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.857
KUN08820.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.815
KUN03934.1
Export associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
KUN04040.1
Stress-induced protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.793
KUN06045.1
Tellurium resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KUN03933.1
Tellurium resistance protein terZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KUN07451.1
Chemical-damaging agent resistance protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.791
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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