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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN05236.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
KUN05237.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.950
era
GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.765
KUN04951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.752
KUN04776.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.752
KUN04790.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.752
KUN05238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
KUN01939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.682
KUN05239.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
KUM99667.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.652
KUN08853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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