Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KUN05289.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)    
Predicted Functional Partners:
KUN05288.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
KUN05362.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
KUN05304.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
KUN05305.1
Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
KUN05306.1
Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.
       0.545
KUN05307.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
KUN05308.1
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.545
KUN05309.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
       0.545
KUN05310.1
Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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