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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN03503.1RNase III inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)    
Predicted Functional Partners:
KUN03623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.808
KUN03504.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
kptA
RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.743
KUN03505.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
KUN02164.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.680
KUN01670.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.670
KUN03261.1
Appr-1-p processing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.665
KUN02949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.597
KUN03428.1
ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.596
KUN03490.1
Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
    0.587
Your Current Organism:
Streptomyces yokosukanensis
NCBI taxonomy Id: 67386
Other names: ATCC 25520, BCRC 11875, CBS 662.69, CCRC 11875, CCRC:11875, DSM 40224, IFO 13108, ISP 5224, JCM 4137, JCM 4559, NBRC 13108, NRRL B-3353, NRRL-ISP 5224, S. yokosukanensis, Streptomyces yokosukensis
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