STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB04129.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
AGB04128.1
Hypothetical protein.
       0.773
AGB04130.1
PFAM: Bacterial regulatory protein, arsR family.
       0.773
AGB04127.1
Hypothetical protein.
       0.539
AGB04126.1
Hypothetical protein.
       0.535
AGB04131.1
Hypothetical protein.
       0.497
AGB04113.1
Hypothetical protein.
       0.480
AGB04114.1
Hypothetical protein.
       0.480
AGB04115.1
Hypothetical protein.
       0.480
AGB04116.1
Hypothetical protein.
       0.480
AGB04117.1
Hypothetical protein.
       0.480
Your Current Organism:
Aciduliprofundum sp. MAR08339
NCBI taxonomy Id: 673860
Other names: A. sp. MAR08-339, Aciduliprofundum sp. MAR08-339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.