STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutHPFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase. (499 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutI
Imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.918
AGB04001.1
Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase family.
 
  
 0.829
AGB03908.1
Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.
  
  
 0.739
AGB04234.1
Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase.
 
     0.716
AGB05315.1
PFAM: Formiminotransferase domain, N-terminal subdomain; Formiminotransferase-cyclodeaminase; Formiminotransferase domain; TIGRFAM: glutamate formiminotransferase.
 
  
 0.691
AGB04233.1
Putative Zn-dependent protease-like protein; PFAM: Putative modulator of DNA gyrase.
       0.677
AGB04235.1
Hypothetical protein.
       0.677
AGB04326.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
  
  
 0.568
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.564
Your Current Organism:
Aciduliprofundum sp. MAR08339
NCBI taxonomy Id: 673860
Other names: A. sp. MAR08-339, Aciduliprofundum sp. MAR08-339
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