Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGB04438.1 | AGB04440.1 | AciM339_0551 | AciM339_0553 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | Transcriptional regulator; PFAM: AsnC family. | 0.549 |
| AGB04438.1 | AGB04441.1 | AciM339_0551 | AciM339_0554 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | Hypothetical protein. | 0.503 |
| AGB04438.1 | fen | AciM339_0551 | AciM339_0552 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.938 |
| AGB04438.1 | guaAB | AciM339_0551 | AciM339_0556 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP. | 0.575 |
| AGB04438.1 | purE | AciM339_0551 | AciM339_0555 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | Phosphoribosylaminoimidazole carboxylase, PurE protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.444 |
| AGB04440.1 | AGB04438.1 | AciM339_0553 | AciM339_0551 | Transcriptional regulator; PFAM: AsnC family. | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | 0.549 |
| AGB04440.1 | AGB04441.1 | AciM339_0553 | AciM339_0554 | Transcriptional regulator; PFAM: AsnC family. | Hypothetical protein. | 0.765 |
| AGB04440.1 | fen | AciM339_0553 | AciM339_0552 | Transcriptional regulator; PFAM: AsnC family. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.607 |
| AGB04440.1 | guaAB | AciM339_0553 | AciM339_0556 | Transcriptional regulator; PFAM: AsnC family. | GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP. | 0.670 |
| AGB04440.1 | purE | AciM339_0553 | AciM339_0555 | Transcriptional regulator; PFAM: AsnC family. | Phosphoribosylaminoimidazole carboxylase, PurE protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.663 |
| AGB04441.1 | AGB04438.1 | AciM339_0554 | AciM339_0551 | Hypothetical protein. | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | 0.503 |
| AGB04441.1 | AGB04440.1 | AciM339_0554 | AciM339_0553 | Hypothetical protein. | Transcriptional regulator; PFAM: AsnC family. | 0.765 |
| AGB04441.1 | fen | AciM339_0554 | AciM339_0552 | Hypothetical protein. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.577 |
| AGB04441.1 | guaAB | AciM339_0554 | AciM339_0556 | Hypothetical protein. | GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP. | 0.702 |
| AGB04441.1 | purE | AciM339_0554 | AciM339_0555 | Hypothetical protein. | Phosphoribosylaminoimidazole carboxylase, PurE protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.681 |
| fen | AGB04438.1 | AciM339_0552 | AciM339_0551 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | 0.938 |
| fen | AGB04440.1 | AciM339_0552 | AciM339_0553 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | Transcriptional regulator; PFAM: AsnC family. | 0.607 |
| fen | AGB04441.1 | AciM339_0552 | AciM339_0554 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | Hypothetical protein. | 0.577 |
| fen | guaAB | AciM339_0552 | AciM339_0556 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit; Catalyzes the synthesis of GMP from XMP. | 0.743 |
| fen | purE | AciM339_0552 | AciM339_0555 | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | Phosphoribosylaminoimidazole carboxylase, PurE protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.533 |
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