STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB04805.1Hypothetical protein; PFAM: Family of unknown function (DUF438); Hemerythrin HHE cation binding domain. (438 aa)    
Predicted Functional Partners:
AGB04806.1
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain.
       0.794
AGB04807.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
     
 0.785
AGB04804.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
       0.509
AGB04803.1
Putative metal-sulfur cluster biosynthetic enzyme; PFAM: Domain of unknown function DUF59.
       0.436
Your Current Organism:
Aciduliprofundum sp. MAR08339
NCBI taxonomy Id: 673860
Other names: A. sp. MAR08-339, Aciduliprofundum sp. MAR08-339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.