node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGB04438.1 | AGB05131.1 | AciM339_0551 | AciM339_1269 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | 0.688 |
AGB04438.1 | AGB05238.1 | AciM339_0551 | AciM339_1381 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | Single-stranded DNA-binding protein. | 0.722 |
AGB04438.1 | AGB05358.1 | AciM339_0551 | AciM339_1505 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | Putative ATPase involved in replication control, Cdc46/Mcm family; PFAM: MCM2/3/5 family; Belongs to the MCM family. | 0.619 |
AGB04438.1 | pcn | AciM339_0551 | AciM339_0521 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | DNA polymerase sliding clamp subunit; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.857 |
AGB04438.1 | priS | AciM339_0551 | AciM339_1321 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | DNA primase, eukaryotic-type, small subunit, putative; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extens [...] | 0.464 |
AGB04438.1 | radA | AciM339_0551 | AciM339_0619 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.414 |
AGB04438.1 | topA | AciM339_0551 | AciM339_0721 | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | DNA topoisomerase I, archaeal; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removin [...] | 0.692 |
AGB05131.1 | AGB04438.1 | AciM339_1269 | AciM339_0551 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | PFAM: Rad51; TIGRFAM: DNA repair and recombination protein RadB. | 0.688 |
AGB05131.1 | AGB05238.1 | AciM339_1269 | AciM339_1381 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | Single-stranded DNA-binding protein. | 0.688 |
AGB05131.1 | AGB05358.1 | AciM339_1269 | AciM339_1505 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | Putative ATPase involved in replication control, Cdc46/Mcm family; PFAM: MCM2/3/5 family; Belongs to the MCM family. | 0.885 |
AGB05131.1 | pcn | AciM339_1269 | AciM339_0521 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | DNA polymerase sliding clamp subunit; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.915 |
AGB05131.1 | priL | AciM339_1269 | AciM339_1339 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | DNA primase, large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.880 |
AGB05131.1 | priS | AciM339_1269 | AciM339_1321 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | DNA primase, eukaryotic-type, small subunit, putative; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extens [...] | 0.868 |
AGB05131.1 | radA | AciM339_1269 | AciM339_0619 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.664 |
AGB05131.1 | topA | AciM339_1269 | AciM339_0721 | DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain; TIGRFAM: DNA polymerase (pol2). | DNA topoisomerase I, archaeal; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removin [...] | 0.542 |
AGB05237.1 | AGB05238.1 | AciM339_1380 | AciM339_1381 | Hypothetical protein. | Single-stranded DNA-binding protein. | 0.955 |
AGB05237.1 | AGB05239.1 | AciM339_1380 | AciM339_1382 | Hypothetical protein. | Hypothetical protein. | 0.784 |
AGB05237.1 | pcn | AciM339_1380 | AciM339_0521 | Hypothetical protein. | DNA polymerase sliding clamp subunit; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.503 |
AGB05237.1 | priL | AciM339_1380 | AciM339_1339 | Hypothetical protein. | DNA primase, large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.672 |
AGB05237.1 | priS | AciM339_1380 | AciM339_1321 | Hypothetical protein. | DNA primase, eukaryotic-type, small subunit, putative; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extens [...] | 0.638 |