STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB05305.1PFAM: EamA-like transporter family. (298 aa)    
Predicted Functional Partners:
AGB05306.1
Geranylgeranyl pyrophosphate synthase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.687
AGB05302.1
Exopolyphosphatase-like enzyme; PFAM: DHH family; DHHA1 domain.
  
    0.678
pfdB
Prefoldin, beta subunit, archaeal; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
       0.668
AGB05304.1
Hypothetical protein; PFAM: Transcription factor Pcc1.
       0.668
pyrI
Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.
 
     0.649
pyrB
PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase.
       0.602
rpl15e
Ribosomal protein L15E; PFAM: Ribosomal L15; Belongs to the eukaryotic ribosomal protein eL15 family.
       0.578
AGB04484.1
Hypothetical protein.
 
 
 0.501
AGB05310.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
     
 0.452
AGB05309.1
PFAM: Predicted permease (DUF2074).
       0.423
Your Current Organism:
Aciduliprofundum sp. MAR08339
NCBI taxonomy Id: 673860
Other names: A. sp. MAR08-339, Aciduliprofundum sp. MAR08-339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.