STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artQABC-type amino acid transport system permease component; Possible 4 transmembrane domain, len:215 aa. (215 aa)    
Predicted Functional Partners:
glnQ
ABC-type amino acid transport system ATPase component.
 
 0.999
artP
ABC-type amino acid transport/signal transduction system periplasmic component; Belongs to the bacterial solute-binding protein 3 family.
 
 0.978
potA
Spermidine/putrescine transport system ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
  0.864
lolD
ABC-type peptide transport system, ATPase component LolD/SalX family.
 
  
 0.860
drrA_2
ABC-type multidrug transport system ATPase component.
    
 0.777
CDK30767.1
F0F1-type ATP synthase epsilon subunit.
  
    0.634
CDK30768.1
HerA helicase.
       0.622
atpD
F0F1-type ATP synthase beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
       0.555
CDK30772.1
Porin superfamily protein.
       0.517
Your Current Organism:
Babela massiliensis
NCBI taxonomy Id: 673862
Other names: C. Babela massiliensis, Candidatus Babela massiliensis, delta proteobacterium BABL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.