STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK31049.1Ankyrin repeats containing protein. (311 aa)    
Predicted Functional Partners:
CDK30408.1
Ankyrin repeats containing protein.
  
     0.773
CDK30407.1
Ankyrin repeats containing protein.
  
     0.752
CDK30426.1
Ankyrin repeats containing protein.
  
     0.751
CDK30994.1
Ankyrin repeats containing protein.
  
     0.714
CDK31043.1
Ankyrin repeats containing protein; Possible 1 transmembrane domain, len:284 aa.
  
     0.708
CDK31022.1
Ankyrin repeats containing protein.
  
     0.696
CDK30191.1
Ankyrin repeats containing protein.
  
     0.695
CDK31079.1
Ankyrin repeats containing protein.
  
     0.660
CDK31048.1
Ankyrin repeats containing protein.
 
    
0.645
CDK30268.1
Ankyrin repeats containing protein; Possible 1 transmembrane domain, len:300 aa.
  
     0.640
Your Current Organism:
Babela massiliensis
NCBI taxonomy Id: 673862
Other names: C. Babela massiliensis, Candidatus Babela massiliensis, delta proteobacterium BABL1
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