STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankX_26Ankyrin repeats containing protein. (418 aa)    
Predicted Functional Partners:
CDK30481.1
Ankyrin repeats containing protein.
  
     0.665
CDK31049.1
Ankyrin repeats containing protein.
 
    
0.572
CDK31048.1
Ankyrin repeats containing protein.
 
    
0.532
CDK30810.1
Ankyrin repeats containing protein.
  
     0.511
pheS
Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
   
 
 0.511
CDK30637.1
Sulfotransferase family protein.
  
 0.482
gtaB
UDP-glucose pyrophosphorylase.
       0.452
degP
Serine protease Do (heat-shock protein).
  
  0.444
htrA
Serine protease Do (heat-shock protein).
  
  0.430
sbcD
DNA repair exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
  0.400
Your Current Organism:
Babela massiliensis
NCBI taxonomy Id: 673862
Other names: C. Babela massiliensis, Candidatus Babela massiliensis, delta proteobacterium BABL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.