STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsrUncharacterized protein containing TROVE and vWA domain. (482 aa)    
Predicted Functional Partners:
CDK30397.1
Immunoglobulin-like repeats containing protein domain; Possible 1 transmembrane domain, len:2683 aa.
 
     0.552
CDK30291.1
Ankyrin repeats containing protein; Possible 1 transmembrane domain, len:447 aa.
       0.511
CDK30311.1
Immunoglobulin-like repeats containing protein domain; Possible 1 transmembrane domain, len:2217 aa.
  
     0.480
CDK30306.1
Immunoglobulin-like repeats containing protein domain.
  
     0.473
noeI_1
Methyltransferase FkbM family; Possible 1 transmembrane domain, len:238 aa.
 
     0.425
CDK30310.1
Immunoglobulin-like repeats containing protein domain; Possible 1 transmembrane domain, len:1781 aa.
 
     0.421
CDK30293.1
Apolipoprotein N-acyltransferase; Possible 6 transmembrane domain, len:468 aa.
       0.417
Your Current Organism:
Babela massiliensis
NCBI taxonomy Id: 673862
Other names: C. Babela massiliensis, Candidatus Babela massiliensis, delta proteobacterium BABL1
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