Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VM_00235 | VM_00240 | VM_00235 | VM_00240 | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
VM_00235 | VM_12250 | VM_00235 | VM_12250 | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | 0.719 |
VM_00235 | VM_15675 | VM_00235 | VM_15675 | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
VM_00235 | VM_20240 | VM_00235 | VM_20240 | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
VM_00235 | fadB | VM_00235 | VM_14805 | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.439 |
VM_00235 | fadJ | VM_00235 | VM_09880 | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.439 |
VM_00240 | VM_00235 | VM_00240 | VM_00235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
VM_12250 | VM_00235 | VM_12250 | VM_00235 | Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.719 |
VM_15675 | VM_00235 | VM_15675 | VM_00235 | GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
VM_20240 | VM_00235 | VM_20240 | VM_00235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
fadB | VM_00235 | VM_14805 | VM_00235 | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
fadB | fadJ | VM_14805 | VM_09880 | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.978 |
fadJ | VM_00235 | VM_09880 | VM_00235 | Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
fadJ | fadB | VM_09880 | VM_14805 | Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.978 |