STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VM_00465Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (136 aa)    
Predicted Functional Partners:
VM_03915
Flagellar rod assembly protein/muramidase FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
fliO
Flagellar biosynthetic protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.944
VM_04325
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.943
VM_03860
Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.910
flhF
Flagellar biosynthesis protein FlhF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.883
VM_04300
Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.881
VM_04315
Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.881
VM_03865
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.853
motB
Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.843
VM_04940
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.842
Your Current Organism:
Vibrio mimicus
NCBI taxonomy Id: 674
Other names: ATCC 33653, CAIM 602, CCUG 13624, CIP 101888, DSM 19130, LMG 7896, LMG:7896, NCTC 11435, V. mimicus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.