Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VM_03870 | VM_19155 | VM_03870 | VM_19155 | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.919 |
| VM_03870 | epmB | VM_03870 | VM_01650 | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| VM_04385 | efp | VM_04385 | VM_01655 | Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.442 |
| VM_04385 | epmA | VM_04385 | VM_01680 | Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.455 |
| VM_04385 | epmB | VM_04385 | VM_01650 | Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.598 |
| VM_19155 | VM_03870 | VM_19155 | VM_03870 | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.919 |
| VM_19155 | epmB | VM_19155 | VM_01650 | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| efp | VM_04385 | VM_01655 | VM_04385 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.442 |
| efp | epmA | VM_01655 | VM_01680 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.894 |
| efp | epmB | VM_01655 | VM_01650 | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.875 |
| epmA | VM_04385 | VM_01680 | VM_04385 | Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| epmA | efp | VM_01680 | VM_01655 | Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.894 |
| epmA | epmB | VM_01680 | VM_01650 | Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.842 |
| epmB | VM_03870 | VM_01650 | VM_03870 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.616 |
| epmB | VM_04385 | VM_01650 | VM_04385 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.598 |
| epmB | VM_19155 | VM_01650 | VM_19155 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.616 |
| epmB | efp | VM_01650 | VM_01655 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.875 |
| epmB | epmA | VM_01650 | VM_01680 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Elongation factor P lysine(34) lysyltransferase; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily. | 0.842 |
| epmB | trpR | VM_01650 | VM_11685 | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription. | 0.447 |
| trpR | epmB | VM_11685 | VM_01650 | Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription. | EF-P beta-lysylation protein EpmB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.447 |