VM_06805 protein (Vibrio mimicus) - STRING interaction network

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Predicted Interactions

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protein homology

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[Homology]

Score

VM_06805

ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)

Predicted Functional Partners:

VM_06810

0.953

VM_07125

0.915

VM_06815

0.852

VM_07120

0.841

VM_20350

0.738

VM_05640

0.702

lolE

0.702

VM_02160

0.701

rpsK

0.678

lolA

0.669

Your Current Organism:

Vibrio mimicus

NCBI taxonomy Id: 674
Other names: ATCC 33653, CAIM 602, CCUG 13624, CIP 101888, DSM 19130, LMG 7896, LMG:7896, NCTC 11435, V. mimicus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VM_02160	VM_06805	VM_02160	VM_06805	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.701
VM_02160	lolA	VM_02160	VM_09320	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.507
VM_05640	VM_06805	VM_05640	VM_06805	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
VM_05640	lolA	VM_05640	VM_09320	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.734
VM_05640	lolE	VM_05640	VM_05650	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein transporter subunit LolE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
VM_06805	VM_02160	VM_06805	VM_02160	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.701
VM_06805	VM_05640	VM_06805	VM_05640	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
VM_06805	VM_06810	VM_06805	VM_06810	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
VM_06805	VM_06815	VM_06805	VM_06815	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydroxyneurosporene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
VM_06805	VM_07120	VM_06805	VM_07120	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
VM_06805	VM_07125	VM_06805	VM_07125	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
VM_06805	VM_20350	VM_06805	VM_20350	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
VM_06805	lolA	VM_06805	VM_09320	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.669
VM_06805	lolE	VM_06805	VM_05650	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein transporter subunit LolE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
VM_06805	rpsK	VM_06805	VM_02070	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.678
VM_06810	VM_06805	VM_06810	VM_06805	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
VM_06810	VM_06815	VM_06810	VM_06815	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydroxyneurosporene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
VM_06810	lolA	VM_06810	VM_09320	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.661
VM_06815	VM_06805	VM_06815	VM_06805	Hydroxyneurosporene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852
VM_06815	VM_06810	VM_06815	VM_06810	Hydroxyneurosporene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953

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