Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VM_09595 | VM_09600 | VM_09595 | VM_09600 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| VM_09595 | VM_14555 | VM_09595 | VM_14555 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| VM_09595 | VM_14560 | VM_09595 | VM_14560 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
| VM_09595 | VM_20120 | VM_09595 | VM_20120 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.876 |
| VM_09595 | btuC | VM_09595 | VM_08655 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Vitamin B12 ABC transporter permease BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane. | 0.782 |
| VM_09595 | btuF | VM_09595 | VM_03050 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalamin-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | 0.897 |
| VM_09600 | VM_09595 | VM_09600 | VM_09595 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| VM_09600 | VM_14560 | VM_09600 | VM_14560 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.956 |
| VM_09600 | VM_17550 | VM_09600 | VM_17550 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| VM_09600 | VM_20120 | VM_09600 | VM_20120 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.455 |
| VM_09600 | btuC | VM_09600 | VM_08655 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Vitamin B12 ABC transporter permease BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane. | 0.820 |
| VM_09600 | btuD | VM_09600 | VM_08650 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Vitamin B12 ABC transporter ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | 0.586 |
| VM_09600 | hmuV | VM_09600 | VM_20110 | Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. | 0.517 |
| VM_14555 | VM_09595 | VM_14555 | VM_09595 | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| VM_14555 | VM_14560 | VM_14555 | VM_14560 | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| VM_14555 | VM_17550 | VM_14555 | VM_17550 | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.708 |
| VM_14555 | btuC | VM_14555 | VM_08655 | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Vitamin B12 ABC transporter permease BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane. | 0.795 |
| VM_14555 | btuD | VM_14555 | VM_08650 | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Vitamin B12 ABC transporter ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system. | 0.517 |
| VM_14555 | hmuV | VM_14555 | VM_20110 | Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heme ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. | 0.412 |
| VM_14560 | VM_09595 | VM_14560 | VM_09595 | ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.906 |
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