Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| VM_00465 | VM_03860 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.910 |
| VM_00465 | VM_04640 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.819 |
| VM_00465 | VM_07475 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.515 |
| VM_00465 | VM_11700 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.596 |
| VM_00465 | VM_13475 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.463 |
| VM_03860 | VM_00465 | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.910 |
| VM_03860 | VM_03870 | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
| VM_03860 | VM_04640 | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.699 |
| VM_03860 | VM_07475 | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.534 |
| VM_03860 | VM_11700 | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.533 |
| VM_03870 | VM_03860 | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
| VM_03870 | VM_04640 | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| VM_03870 | VM_11700 | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.611 |
| VM_03870 | VM_19155 | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.919 |
| VM_04640 | VM_00465 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.819 |
| VM_04640 | VM_03860 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagella basal body P-ring formation protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.699 |
| VM_04640 | VM_03870 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| VM_04640 | VM_07475 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| VM_04640 | VM_11700 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pilus assembly protein PilZ; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.727 |
| VM_04640 | VM_13470 | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
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