| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VM_00010 | VM_14580 | VM_00010 | VM_14580 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| VM_00010 | VM_14945 | VM_00010 | VM_14945 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.663 |
| VM_00010 | mutL | VM_00010 | VM_13845 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.942 |
| VM_00010 | recA | VM_00010 | VM_12485 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.866 |
| VM_00010 | topA | VM_00010 | VM_06305 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.593 |
| VM_14580 | VM_00010 | VM_14580 | VM_00010 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.757 |
| VM_14580 | VM_14945 | VM_14580 | VM_14945 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.686 |
| VM_14580 | mutL | VM_14580 | VM_13845 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.744 |
| VM_14580 | recA | VM_14580 | VM_12485 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.825 |
| VM_14580 | topA | VM_14580 | VM_06305 | ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.999 |
| VM_14925 | VM_14930 | VM_14925 | VM_14930 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| VM_14925 | VM_14935 | VM_14925 | VM_14935 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
| VM_14925 | VM_14940 | VM_14925 | VM_14940 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.709 |
| VM_14925 | VM_14945 | VM_14925 | VM_14945 | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.710 |
| VM_14930 | VM_14925 | VM_14930 | VM_14925 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| VM_14930 | VM_14935 | VM_14930 | VM_14935 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| VM_14930 | VM_14940 | VM_14930 | VM_14940 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
| VM_14930 | VM_14945 | VM_14930 | VM_14945 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.693 |
| VM_14935 | VM_14925 | VM_14935 | VM_14925 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
| VM_14935 | VM_14930 | VM_14935 | VM_14930 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |