Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
clcAChloride channel protein; Probably acts as an electrical shunt for an outwardly- directed proton pump that is linked to amino acid decarboxylation, as part of the extreme acid resistance (XAR) response. Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily. (468 aa)    
Predicted Functional Partners:
VM_15665
Tellurium resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
VM_13585
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.483
VM_03170
Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.444
VM_07690
Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.444
VM_11315
Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.444
VM_15660
CAI-1 autoinducer synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.427
Your Current Organism:
Vibrio mimicus
NCBI taxonomy Id: 674
Other names: ATCC 33653, CAIM 602, CCUG 13624, CIP 101888, DSM 19130, LMG 7896, LMG:7896, NCTC 11435, V. mimicus
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