Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VM_16900 | VM_19100 | VM_16900 | VM_19100 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.508 |
VM_19100 | VM_16900 | VM_19100 | VM_16900 | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.508 |
VM_19100 | VM_19110 | VM_19100 | VM_19110 | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
VM_19100 | flgG | VM_19100 | VM_03900 | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.427 |
VM_19100 | flgG-2 | VM_19100 | VM_19745 | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | 0.427 |
VM_19100 | msbB | VM_19100 | VM_14505 | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | 0.903 |
VM_19110 | VM_19100 | VM_19110 | VM_19100 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
flgG | VM_19100 | VM_03900 | VM_19100 | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
flgG-2 | VM_19100 | VM_19745 | VM_19100 | Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family. | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
msbB | VM_19100 | VM_14505 | VM_19100 | Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | Phosphoethanolamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.903 |