Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VM_01670 | VM_07360 | VM_01670 | VM_07360 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |
| VM_01670 | VM_08870 | VM_01670 | VM_08870 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
| VM_01670 | VM_17035 | VM_01670 | VM_17035 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sn-glycerol-3-phosphate dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.610 |
| VM_01670 | VM_19535 | VM_01670 | VM_19535 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
| VM_01670 | ccoP | VM_01670 | VM_07575 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.634 |
| VM_01670 | sdhB | VM_01670 | VM_04505 | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.913 |
| VM_07360 | VM_01670 | VM_07360 | VM_01670 | (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.782 |
| VM_07360 | VM_08870 | VM_07360 | VM_08870 | (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
| VM_07360 | VM_19535 | VM_07360 | VM_19535 | (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
| VM_07360 | sdhB | VM_07360 | VM_04505 | (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.782 |
| VM_08870 | VM_01670 | VM_08870 | VM_01670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.653 |
| VM_08870 | VM_07360 | VM_08870 | VM_07360 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
| VM_08870 | VM_17035 | VM_08870 | VM_17035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sn-glycerol-3-phosphate dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
| VM_08870 | VM_18045 | VM_08870 | VM_18045 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| VM_08870 | VM_19535 | VM_08870 | VM_19535 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.662 |
| VM_08870 | VM_19545 | VM_08870 | VM_19545 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.703 |
| VM_08870 | ccoP | VM_08870 | VM_07575 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.713 |
| VM_08870 | lldD | VM_08870 | VM_19540 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha-hydroxy-acid oxidizing enzyme; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family. | 0.874 |
| VM_08870 | plsB | VM_08870 | VM_00445 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol-3-phosphate 1-O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family. | 0.692 |
| VM_08870 | sdhB | VM_08870 | VM_04505 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.653 |
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