STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000383855_03189Unannotated protein. (121 aa)    
Predicted Functional Partners:
GCA_000383855_03188
Unannotated protein.
       0.511
GCA_000383855_01105
Unannotated protein.
  
     0.446
GCA_000383855_02335
Unannotated protein.
  
    0.440
GCA_000383855_04540
Unannotated protein.
  
     0.426
GCA_000383855_01646
Unannotated protein.
  
     0.405
Your Current Organism:
Methylobacter marinus
NCBI taxonomy Id: 674036
Other names: M. marinus A45, Methylobacter marinus A45, Methylobacter marinus str. A45, Methylobacter marinus strain A45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.