STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38479.1Inducible gentisate 1,2 dioxygenase. (348 aa)    
Predicted Functional Partners:
AMN38478.1
Salicylate hydroxylase.
 
   
 0.926
AMN39216.1
3-hydroxybenzoate-6-hydroxylase.
 
   
 0.739
AMN40523.1
Salicylate hydroxylase.
 
   
 0.733
AMN38480.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
     
 0.689
AMN44250.1
3-hydroxybenzoate-6-hydroxylase.
 
   
 0.676
AMN38477.1
Rieske (2Fe-2S) protein.
     
 0.607
AMN45403.1
4-hydroxybenzoyl-CoA thioesterase.
 
     0.576
AMN40521.1
Transcriptional regulator, MarR family.
  
     0.506
AMN38475.1
Protocatechuate 4,5-dioxygenase subunit alpha.
 
   
 0.491
AMN41098.1
MarR family transcriptional regulator.
  
     0.468
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.