STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38489.1ABC transporter ATP-binding protein. (262 aa)    
Predicted Functional Partners:
AMN38488.1
ABC transporter permease.
 
 0.999
AMN38490.1
ABC transporter substrate-binding protein.
 
 0.999
AMN42248.1
Dipeptide/oligopeptide/nickel ABC transporter, permease protein.
 
      0.825
AMN45190.1
Molybdate ABC transporter permease ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.811
AMN40553.1
Dipeptide/oligopeptide/nickel ABC transporter permease.
 
      0.687
AMN44027.1
Peptide ABC transporter permease protein.
 
      0.647
nuoA
NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
   
    0.617
AMN41514.1
Oligopeptide permease OppC.
 
      0.581
AMN42673.1
Dipeptide transport system permease protein DppC.
 
      0.518
AMN41704.1
ABC transporter ATP-binding protein.
    
 0.509
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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