STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38611.1ABC transporter periplasmic ligand-binding protein. (292 aa)    
Predicted Functional Partners:
AMN38608.1
NAD(P)H-nitrite reductase.
  
  
 0.679
AMN38609.1
3-methyl-2-oxobutanoate hydroxymethyltransferase.
       0.668
AMN38610.1
Hypothetical protein.
       0.668
AMN43794.1
ABC transporter substrate-binding protein.
  
     0.622
AMN39702.1
CHAD domain-containing protein.
  
     0.520
AMN41498.1
MarR family transcriptional regulator.
  
     0.475
AMN40071.1
MarR family transcriptional regulator.
  
     0.473
AMN38607.1
IclR family transcriptional regulator.
       0.469
AMN41223.1
Acetolactate synthase II; Belongs to the TPP enzyme family.
  
     0.452
AMN40712.1
MarR family transcriptional regulator.
  
     0.451
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.