STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38655.1Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein. (301 aa)    
Predicted Functional Partners:
AMN40757.1
ABC transporter inner membrane protein.
  
    0.813
AMN40097.1
NitT/TauT family transport system permease protein; Nitrate/sulfonate/taurine/bicarbonate ABC superfamily ATP binding cassette transporter, membrane protein.
  
    0.812
AMN40756.1
ABC transporter ATP-binding protein.
  
    0.811
AMN40098.1
ABC transporter ATP-binding protein.
  
    0.805
AMN41545.1
Binding-protein-dependent transport systems inner membrane component.
  
    0.800
AMN38656.1
Mandelate racemase / L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.773
AMN41544.1
ABC transporter periplasmic protein.
  
     0.773
AMN40923.1
ABC transporter substrate-binding protein.
  
     0.706
AMN38654.1
Extra-cytoplasmic solute receptor.
       0.540
AMN38657.1
Alpha/beta hydrolase fold protein.
 
     0.539
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.