STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38690.1TRAP transporter solute receptor, TAXI family. (430 aa)    
Predicted Functional Partners:
AMN38689.1
Aldo/keto reductase.
       0.697
AMN42261.1
TRAP transporter solute receptor, TAXI family.
  
     0.666
AMN44148.1
Sulfatase.
  
     0.664
AMN44147.1
Sulfatase.
  
     0.659
AMN40731.1
Cyclic nucleotide-binding protein.
  
     0.601
AMN40775.1
RND superfamily transporter.
  
     0.575
AMN38972.1
Hypothetical protein.
  
     0.545
AMN39438.1
Heterodisulfide reductase, subunit D.
 
     0.543
AMN38802.1
Peptidoglycan binding domain-containing protein.
  
     0.528
AMN40881.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.518
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.