STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38786.12-hydroxymuconic semialdehyde hydrolase. (264 aa)    
Predicted Functional Partners:
AMN41757.1
NADH-ubiquinone oxidoreductase.
  
     0.623
AMN38785.1
Glycosyl transferase group 1.
  
    0.560
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
 
     0.558
AMN42553.1
MAPEG family protein.
  
     0.538
AMN42563.1
ATP12 ATPase.
  
     0.534
AMN43644.1
Lipooligosaccharide galactosyltransferase I.
  
     0.496
AMN38717.1
Transporter.
  
     0.493
AMN40932.1
Hypothetical protein.
  
     0.453
AMN39127.1
Amino acid adenylation enzyme/thioester reductase family protein.
   
 
 0.426
AMN38795.1
Putative alpha-1,3-fucosyltransferase.
  
 
   0.423
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.