STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN38892.1ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein. (338 aa)    
Predicted Functional Partners:
AMN44791.1
ABC transporter substrate-binding protein.
  
     0.617
AMN42295.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
  
     0.614
AMN41544.1
ABC transporter periplasmic protein.
  
     0.612
AMN45446.1
ABC transporter substrate-binding protein.
  
     0.606
AMN40224.1
NMT1/THI5 like domain-containing protein.
  
     0.597
AMN44836.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
  
     0.586
AMN39345.1
ABC transporter substrate-binding protein.
  
     0.581
AMN44143.1
ABC transporter substrate-binding protein.
  
     0.559
AMN45265.1
ABC transporter substrate-binding protein.
  
     0.558
AMN40544.1
Extracellular solute-binding protein, family 1.
  
     0.541
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.