STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39284.1MarR family transcriptional regulator. (158 aa)    
Predicted Functional Partners:
AMN39285.1
Extra-cytoplasmic solute receptor.
       0.773
AMN43988.1
MarR family transcriptional regulator.
  
     0.700
AMN39286.1
Xenobiotic compound monooxygenase A subunit.
       0.517
AMN43253.1
Transcriptional regulator, MarR family.
  
     0.504
AMN44527.1
Transcriptional regulator, MarR family.
  
     0.462
AMN44268.1
Glycine betaine ABC transporter substrate-binding protein.
  
  
 0.445
AMN38830.1
MarR family transcriptional regulator.
  
     0.426
AMN45401.1
feruloyl-CoA synthase.
  
     0.410
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.