STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39314.1ISSpo6, transposase orfA. (119 aa)    
Predicted Functional Partners:
AMN39313.1
ISSpo6, transposase orfB.
    0.864
AMN45476.1
ISSpo6, transposase orfB.
    0.445
AMN38508.1
IS630 family transposase, OrfC.
    0.433
AMN42546.1
ISSpo6, transposase orfB.
    0.433
AMN38659.1
IS630 family transposase, OrfC.
    0.424
AMN38858.1
ISSpo6, transposase orfB.
    0.424
AMN39182.1
ISSpo6, transposase orfB.
    0.424
AMN40690.1
ISSpo6, transposase orfB.
    0.424
AMN40773.1
ISSpo6, transposase orfB.
    0.424
AMN40779.1
ISSpo6, transposase orfB.
    0.424
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.