STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39368.1ABC transporter permease. (271 aa)    
Predicted Functional Partners:
AMN39329.1
Aliphatic sulfonates ABC transporter.
  
     0.766
AMN39369.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
    0.760
AMN39367.1
Nitrate/sulfonate/bicarbonate ABC transporter ATPase.
 
    0.644
AMN39365.1
4,5-dihydroxyphthalate decarboxylase.
  
    0.573
AMN39366.1
ABC transporter permease.
 
    
0.555
AMN43971.1
ABC transporter substrate-binding protein.
  
    0.531
AMN39295.1
ABC transporter, substrate-binding protein, aliphatic sulfonates family.
  
    0.515
AMN42056.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
  
    0.468
AMN42239.1
Sulfonate/nitrate transport system substrate-binding protein.
 
    0.463
AMN45440.1
Aliphatic sulfonates-binding protein.
  
    0.454
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.