STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39420.1Hypothetical protein. (394 aa)    
Predicted Functional Partners:
AMN39422.1
ABC transporter substrate-binding protein.
 
     0.631
AMN39421.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
       0.566
AMN39377.1
Alpha/beta hydrolase fold protein.
 
     0.541
AMN39423.1
Luciferase-like protein.
 
     0.493
AMN44886.1
Alpha/beta hydrolase fold protein.
 
     0.482
AMN40264.1
Transmembrane adenylate cyclase.
 
     0.473
AMN43396.1
Cytochrome c556.
  
     0.470
AMN40377.1
Methyltransferase.
  
     0.465
AMN38555.1
ABC transporter substrate-binding protein.
  
     0.462
AMN42406.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein.
  
     0.459
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.