STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39635.1DNA-3-methyladenine glycosidase II. (265 aa)    
Predicted Functional Partners:
AMN40434.1
DNA-3-methyladenine glycosylase II.
  
  
 
0.926
AMN39634.1
Phospholipase/carboxylesterase.
    
 0.853
AMN39636.1
Glutamyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.601
AMN40783.1
O-6-methylguanine DNA methyltransferase.
  
  
 0.587
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.574
AMN38679.1
Exodeoxyribonuclease III.
  
 0.518
AMN39794.1
Exodeoxyribonuclease III.
  
 0.518
AMN41853.1
Exodeoxyribonuclease III.
  
 0.518
AMN39633.1
HNH endonuclease.
       0.514
AMN39637.1
Two-component hybrid sensor and regulator.
  
    0.491
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.