STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39701.1TPR repeat-containing protein. (563 aa)    
Predicted Functional Partners:
AMN42320.1
NADH-quinone oxidoreductase subunit M.
  
 
 0.834
AMN39700.1
Glutathione S-transferase domain-containing protein; Belongs to the GST superfamily.
  
 
 0.785
AMN41276.1
O-linked N-acetylglucosamine transferase, SPINDLY family.
 
 0.777
AMN41289.1
Peptidase C14 caspase catalytic subunit p20.
   
 0.746
AMN40955.1
Peptidase C14 caspase catalytic subunit p20.
 
   
 0.726
AMN41942.1
Cyclophilin type peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.656
AMN41944.1
Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.656
AMN39699.1
Aliphatic sulfonates ABC transporter.
 
     0.608
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.570
AMN45326.1
Two-component hybrid sensor and regulator.
  
 
 0.558
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.