STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39785.1Oxidoreductase domain-containing protein. (362 aa)    
Predicted Functional Partners:
AMN43586.1
Oxidoreductase family protein.
  
     0.772
AMN39437.1
Oxidoreductase domain-containing protein.
  
     0.762
AMN43404.1
Oxidoreductase.
  
     0.757
AMN39540.1
Oxidoreductase domain-containing protein.
  
     0.754
AMN43210.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.723
AMN43423.1
DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.713
AMN43453.1
Spore coat polysaccharide biosynthesis protein spsC; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.678
AMN43642.1
Glutamine--scyllo-inositol transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.678
AMN39786.1
TTT family tricarboxylate transporter, receptor protein.
       0.631
AMN44580.1
4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein.
  
  
 0.572
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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