STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39800.14-hydroxy-2-oxoglutarate aldolase. (209 aa)    
Predicted Functional Partners:
AMN39811.1
2-dehydro-3-deoxygluconate kinase.
 
 
 0.972
tal
Transaldolase phosphoglucose isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.918
AMN39869.1
FAD linked oxidase-like protein.
   
 
 0.909
AMN40348.1
Glycolate oxidase subunit GlcD.
   
 
 0.909
AMN44033.1
FAD/FMN-dependent dehydrogenase.
   
 
 0.909
AMN38847.1
Glyoxylate reductase /Hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.906
AMN44438.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.906
AMN39870.1
Glycolate oxidase subunit F.
     
 0.905
AMN40220.1
2-hydroxyacid dehydrogenase, putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.904
AMN44622.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.904
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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