STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN39898.1Methionine synthase, vitamin-B12 independent. (349 aa)    
Predicted Functional Partners:
AMN38570.1
S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
  
 0.797
ahcY
S-adenosylhomocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 
 0.783
AMN41153.1
O-succinylhomoserine (thiol)-lyase.
  
 
 0.759
AMN41789.1
Cystathionine beta-lyase.
  
 
 0.759
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.759
AMN45024.1
Cystathionine gamma-synthase.
  
 
 0.759
AMN41737.1
Homoserine dehydrogenase.
   
 
 0.689
AMN41991.1
O-acetylhomoserine/O-acetylserine sulfhydrylase.
  
 
 0.683
AMN42262.1
O-acetylhomoserine sulfhydrylase.
  
 
 0.683
AMN44392.1
Putative aminotransferase.
    
  0.656
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.