STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40155.1Stomatin/prohibitin-family membrane protease subunit YbbK. (331 aa)    
Predicted Functional Partners:
AMN40156.1
Transmembrane protein.
 
  
 0.965
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.809
AMN44163.1
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
  
   
 0.617
AMN43849.1
Pyruvate phosphate dikinase PEP/pyruvate-binding protein.
  
 
 0.566
AMN40154.1
Kelch repeat-containing protein.
       0.510
AMN40275.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
    0.488
AMN40157.1
Hypothetical protein.
       0.471
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.470
AMN42729.1
Rhomboid family protein.
   
 0.467
AMN40008.1
Zn-dependent protease.
  
 0.407
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.