STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN40235.1Alpha/beta-hydrolase. (382 aa)    
Predicted Functional Partners:
AMN42795.1
Methyltransferase CmcJ.
  
     0.716
AMN44391.1
Thiamine pyrophosphate protein domain-containing protein TPP-binding protein.
  
     0.683
AMN38537.1
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase.
  
     0.680
AMN44944.1
Acetolactate synthase.
  
     0.659
AMN44908.1
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein.
  
   
 0.624
AMN40368.1
Thiamine pyrophosphate protein domain-containing protein TPP-binding protein; Belongs to the TPP enzyme family.
  
     0.593
AMN41497.1
Thiamine pyrophosphate protein domain-containing protein TPP-binding protein.
  
     0.579
AMN41890.1
Haloacid dehalogenase.
 
  
 0.568
AMN43041.1
Flavin-containing monooxygenase.
  
 
 0.568
AMN42086.1
Cupin domain protein.
  
     0.539
Your Current Organism:
Rhodoplanes sp. Z2YC6860
NCBI taxonomy Id: 674703
Other names: R. sp. Z2-YC6860, Rhodoplanes sp. Z2-YC6860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.